scipy.stats.johnsonsu

scipy.stats.johnsonsu = <scipy.stats._continuous_distns.johnsonsu_gen object>

A Johnson SU continuous random variable.

As an instance of the rv_continuous class, johnsonsu object inherits from it a collection of generic methods (see below for the full list), and completes them with details specific for this particular distribution.

Methods

rvs(a, b, loc=0, scale=1, size=1, random_state=None)	Random variates.
pdf(x, a, b, loc=0, scale=1)	Probability density function.
logpdf(x, a, b, loc=0, scale=1)	Log of the probability density function.
cdf(x, a, b, loc=0, scale=1)	Cumulative distribution function.
logcdf(x, a, b, loc=0, scale=1)	Log of the cumulative distribution function.
sf(x, a, b, loc=0, scale=1)	Survival function (also defined as 1 - cdf, but sf is sometimes more accurate).
logsf(x, a, b, loc=0, scale=1)	Log of the survival function.
ppf(q, a, b, loc=0, scale=1)	Percent point function (inverse of cdf — percentiles).
isf(q, a, b, loc=0, scale=1)	Inverse survival function (inverse of sf).
moment(order, a, b, loc=0, scale=1)	Non-central moment of the specified order.
stats(a, b, loc=0, scale=1, moments=’mv’)	Mean(‘m’), variance(‘v’), skew(‘s’), and/or kurtosis(‘k’).
entropy(a, b, loc=0, scale=1)	(Differential) entropy of the RV.
fit(data)	Parameter estimates for generic data. See scipy.stats.rv_continuous.fit for detailed documentation of the keyword arguments.
expect(func, args=(a, b), loc=0, scale=1, lb=None, ub=None, conditional=False, **kwds)	Expected value of a function (of one argument) with respect to the distribution.
median(a, b, loc=0, scale=1)	Median of the distribution.
mean(a, b, loc=0, scale=1)	Mean of the distribution.
var(a, b, loc=0, scale=1)	Variance of the distribution.
std(a, b, loc=0, scale=1)	Standard deviation of the distribution.
interval(confidence, a, b, loc=0, scale=1)	Confidence interval with equal areas around the median.

See also

johnsonsb

Notes

The probability density function for johnsonsu is:

\[f(x, a, b) = \frac{b}{\sqrt{x^2 + 1}} \phi(a + b \log(x + \sqrt{x^2 + 1}))\]

where \(x\), \(a\), and \(b\) are real scalars; \(b > 0\). \(\phi\) is the pdf of the normal distribution.

johnsonsu takes \(a\) and \(b\) as shape parameters.

The first four central moments are calculated according to the formulas in [1].

The probability density above is defined in the “standardized” form. To shift and/or scale the distribution use the loc and scale parameters. Specifically, johnsonsu.pdf(x, a, b, loc, scale) is identically equivalent to johnsonsu.pdf(y, a, b) / scale with y = (x - loc) / scale. Note that shifting the location of a distribution does not make it a “noncentral” distribution; noncentral generalizations of some distributions are available in separate classes.

References

[1]

Taylor Enterprises. “Johnson Family of Distributions”. https://variation.com/wp-content/distribution_analyzer_help/hs126.htm

Examples

Try it in your browser!

>>> import numpy as np
>>> from scipy.stats import johnsonsu
>>> import matplotlib.pyplot as plt
>>> fig, ax = plt.subplots(1, 1)

Calculate the first four moments:

>>> a, b = 2.55, 2.25
>>> mean, var, skew, kurt = johnsonsu.stats(a, b, moments='mvsk')

Display the probability density function (pdf):

>>> x = np.linspace(johnsonsu.ppf(0.01, a, b),
...                 johnsonsu.ppf(0.99, a, b), 100)
>>> ax.plot(x, johnsonsu.pdf(x, a, b),
...        'r-', lw=5, alpha=0.6, label='johnsonsu pdf')

Alternatively, the distribution object can be called (as a function) to fix the shape, location and scale parameters. This returns a “frozen” RV object holding the given parameters fixed.

Freeze the distribution and display the frozen pdf:

>>> rv = johnsonsu(a, b)
>>> ax.plot(x, rv.pdf(x), 'k-', lw=2, label='frozen pdf')

Check accuracy of cdf and ppf:

>>> vals = johnsonsu.ppf([0.001, 0.5, 0.999], a, b)
>>> np.allclose([0.001, 0.5, 0.999], johnsonsu.cdf(vals, a, b))
True

Generate random numbers:

>>> r = johnsonsu.rvs(a, b, size=1000)

And compare the histogram:

>>> ax.hist(r, density=True, bins='auto', histtype='stepfilled', alpha=0.2)
>>> ax.set_xlim([x[0], x[-1]])
>>> ax.legend(loc='best', frameon=False)
>>> plt.show()

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