scipy.stats.gengamma

scipy.stats.gengamma = <scipy.stats._continuous_distns.gengamma_gen object>

A generalized gamma continuous random variable.

As an instance of the rv_continuous class, gengamma object inherits from it a collection of generic methods (see below for the full list), and completes them with details specific for this particular distribution.

Notes

The probability density function for gengamma is:

gengamma.pdf(x, a, c) = abs(c) * x**(c*a-1) * exp(-x**c) / gamma(a)

for x >= 0, a > 0, and c != 0.

gengamma takes a and c as shape parameters.

The probability density above is defined in the “standardized” form. To shift and/or scale the distribution use the loc and scale parameters. Specifically, gengamma.pdf(x, a, c, loc, scale) is identically equivalent to gengamma.pdf(y, a, c) / scale with y = (x - loc) / scale.

Examples

>>> from scipy.stats import gengamma
>>> import matplotlib.pyplot as plt
>>> fig, ax = plt.subplots(1, 1)

Calculate a few first moments:

>>> a, c = 4.42, -3.12
>>> mean, var, skew, kurt = gengamma.stats(a, c, moments='mvsk')

Display the probability density function (pdf):

>>> x = np.linspace(gengamma.ppf(0.01, a, c),
...                 gengamma.ppf(0.99, a, c), 100)
>>> ax.plot(x, gengamma.pdf(x, a, c),
...        'r-', lw=5, alpha=0.6, label='gengamma pdf')

Alternatively, the distribution object can be called (as a function) to fix the shape, location and scale parameters. This returns a “frozen” RV object holding the given parameters fixed.

Freeze the distribution and display the frozen pdf:

>>> rv = gengamma(a, c)
>>> ax.plot(x, rv.pdf(x), 'k-', lw=2, label='frozen pdf')

Check accuracy of cdf and ppf:

>>> vals = gengamma.ppf([0.001, 0.5, 0.999], a, c)
>>> np.allclose([0.001, 0.5, 0.999], gengamma.cdf(vals, a, c))
True

Generate random numbers:

>>> r = gengamma.rvs(a, c, size=1000)

And compare the histogram:

>>> ax.hist(r, normed=True, histtype='stepfilled', alpha=0.2)
>>> ax.legend(loc='best', frameon=False)
>>> plt.show()

(Source code)

Methods

rvs(a, c, loc=0, scale=1, size=1, random_state=None)	Random variates.
pdf(x, a, c, loc=0, scale=1)	Probability density function.
logpdf(x, a, c, loc=0, scale=1)	Log of the probability density function.
cdf(x, a, c, loc=0, scale=1)	Cumulative distribution function.
logcdf(x, a, c, loc=0, scale=1)	Log of the cumulative distribution function.
sf(x, a, c, loc=0, scale=1)	Survival function (also defined as 1 - cdf, but sf is sometimes more accurate).
logsf(x, a, c, loc=0, scale=1)	Log of the survival function.
ppf(q, a, c, loc=0, scale=1)	Percent point function (inverse of cdf — percentiles).
isf(q, a, c, loc=0, scale=1)	Inverse survival function (inverse of sf).
moment(n, a, c, loc=0, scale=1)	Non-central moment of order n
stats(a, c, loc=0, scale=1, moments='mv')	Mean(‘m’), variance(‘v’), skew(‘s’), and/or kurtosis(‘k’).
entropy(a, c, loc=0, scale=1)	(Differential) entropy of the RV.
fit(data, a, c, loc=0, scale=1)	Parameter estimates for generic data.
expect(func, args=(a, c), loc=0, scale=1, lb=None, ub=None, conditional=False, **kwds)	Expected value of a function (of one argument) with respect to the distribution.
median(a, c, loc=0, scale=1)	Median of the distribution.
mean(a, c, loc=0, scale=1)	Mean of the distribution.
var(a, c, loc=0, scale=1)	Variance of the distribution.
std(a, c, loc=0, scale=1)	Standard deviation of the distribution.
interval(alpha, a, c, loc=0, scale=1)	Endpoints of the range that contains alpha percent of the distribution