scipy.stats.invwishart#

scipy.stats.invwishart = <scipy.stats._multivariate.invwishart_gen object>[source]#

An inverse Wishart random variable.

The df keyword specifies the degrees of freedom. The scale keyword specifies the scale matrix, which must be symmetric and positive definite. In this context, the scale matrix is often interpreted in terms of a multivariate normal covariance matrix.

Parameters

xarray_like

Quantiles, with the last axis of x denoting the components.

dfint

Degrees of freedom, must be greater than or equal to dimension of the scale matrix

scalearray_like

Symmetric positive definite scale matrix of the distribution

random_state{None, int, numpy.random.Generator,

numpy.random.RandomState}, optional

If seed is None (or np.random), the numpy.random.RandomState singleton is used. If seed is an int, a new RandomState instance is used, seeded with seed. If seed is already a Generator or RandomState instance then that instance is used.

Alternatively, the object may be called (as a function) to fix the degrees

of freedom and scale parameters, returning a “frozen” inverse Wishart

random variable:

rv = invwishart(df=1, scale=1)

Frozen object with the same methods but holding the given degrees of freedom and scale fixed.

See also

wishart

Notes

The scale matrix scale must be a symmetric positive definite matrix. Singular matrices, including the symmetric positive semi-definite case, are not supported.

The inverse Wishart distribution is often denoted

\[W_p^{-1}(\nu, \Psi)\]

where \(\nu\) is the degrees of freedom and \(\Psi\) is the \(p \times p\) scale matrix.

The probability density function for invwishart has support over positive definite matrices \(S\); if \(S \sim W^{-1}_p(\nu, \Sigma)\), then its PDF is given by:

\[f(S) = \frac{|\Sigma|^\frac{\nu}{2}}{2^{ \frac{\nu p}{2} } |S|^{\frac{\nu + p + 1}{2}} \Gamma_p \left(\frac{\nu}{2} \right)} \exp\left( -tr(\Sigma S^{-1}) / 2 \right)\]

If \(S \sim W_p^{-1}(\nu, \Psi)\) (inverse Wishart) then \(S^{-1} \sim W_p(\nu, \Psi^{-1})\) (Wishart).

If the scale matrix is 1-dimensional and equal to one, then the inverse Wishart distribution \(W_1(\nu, 1)\) collapses to the inverse Gamma distribution with parameters shape = \(\frac{\nu}{2}\) and scale = \(\frac{1}{2}\).

New in version 0.16.0.

References

1: M.L. Eaton, “Multivariate Statistics: A Vector Space Approach”, Wiley, 1983.
2: M.C. Jones, “Generating Inverse Wishart Matrices”, Communications in Statistics - Simulation and Computation, vol. 14.2, pp.511-514, 1985.

Examples

>>> import matplotlib.pyplot as plt
>>> from scipy.stats import invwishart, invgamma
>>> x = np.linspace(0.01, 1, 100)
>>> iw = invwishart.pdf(x, df=6, scale=1)
>>> iw[:3]
array([  1.20546865e-15,   5.42497807e-06,   4.45813929e-03])
>>> ig = invgamma.pdf(x, 6/2., scale=1./2)
>>> ig[:3]
array([  1.20546865e-15,   5.42497807e-06,   4.45813929e-03])
>>> plt.plot(x, iw)

The input quantiles can be any shape of array, as long as the last axis labels the components.

../../_images/scipy-stats-invwishart-1.png

Methods

``pdf(x, df, scale)``	Probability density function.
``logpdf(x, df, scale)``	Log of the probability density function.
``rvs(df, scale, size=1, random_state=None)``	Draw random samples from an inverse Wishart distribution.

scipy.stats.wishart

scipy.stats.multinomial