scipy.stats.obrientransform

scipy.stats.obrientransform(*args)

Compute the O’Brien transform on input data (any number of arrays).

Used to test for homogeneity of variance prior to running one-way stats. Each array in *args is one level of a factor. If f_oneway is run on the transformed data and found significant, the variances are unequal. From Maxwell and Delaney [1], p.112.

Parameters

argstuple of array_like

Any number of arrays.

Returns

obrientransformndarray

Transformed data for use in an ANOVA. The first dimension of the result corresponds to the sequence of transformed arrays. If the arrays given are all 1-D of the same length, the return value is a 2-D array; otherwise it is a 1-D array of type object, with each element being an ndarray.

References

1

S. E. Maxwell and H. D. Delaney, “Designing Experiments and Analyzing Data: A Model Comparison Perspective”, Wadsworth, 1990.

Examples

We’ll test the following data sets for differences in their variance.

>>> x = [10, 11, 13, 9, 7, 12, 12, 9, 10]
>>> y = [13, 21, 5, 10, 8, 14, 10, 12, 7, 15]

Apply the O’Brien transform to the data.

>>> from scipy.stats import obrientransform
>>> tx, ty = obrientransform(x, y)

Use scipy.stats.f_oneway to apply a one-way ANOVA test to the transformed data.

>>> from scipy.stats import f_oneway
>>> F, p = f_oneway(tx, ty)
>>> p
0.1314139477040335

If we require that p < 0.05 for significance, we cannot conclude that the variances are different.

scipy.stats.yeojohnson_llf scipy.stats.sigmaclip