scipy.ndimage.morphology.grey_closing

scipy.ndimage.morphology.grey_closing(input, size=None, footprint=None, structure=None, output=None, mode='reflect', cval=0.0, origin=0)

Multi-dimensional greyscale closing.

A greyscale closing consists in the succession of a greyscale dilation, and a greyscale erosion.

Parameters :

input : array_like

Array over which the grayscale closing is to be computed.

size : tuple of ints

Shape of a flat and full structuring element used for the grayscale closing. Optional if footprint is provided.

footprint : array of ints, optional

Positions of non-infinite elements of a flat structuring element used for the grayscale closing.

structure : array of ints, optional

Structuring element used for the grayscale closing. structure may be a non-flat structuring element.

output : array, optional

An array used for storing the ouput of the closing may be provided.

mode : {‘reflect’,’constant’,’nearest’,’mirror’, ‘wrap’}, optional

The mode parameter determines how the array borders are handled, where cval is the value when mode is equal to ‘constant’. Default is ‘reflect’

cval : scalar, optional

Value to fill past edges of input if mode is ‘constant’. Default is 0.0.

origin : scalar, optional

The origin parameter controls the placement of the filter. Default 0

Returns :

output : ndarray

Result of the grayscale closing of input with structure.

See also

binary_closing, grey_dilation, grey_erosion, grey_opening, generate_binary_structure

Notes

The action of a grayscale closing with a flat structuring element amounts to smoothen deep local minima, whereas binary closing fills small holes.

References

[R48]

http://en.wikipedia.org/wiki/Mathematical_morphology

Examples

>>> a = np.arange(36).reshape((6,6))
>>> a[3,3] = 0
>>> a
array([[ 0,  1,  2,  3,  4,  5],
       [ 6,  7,  8,  9, 10, 11],
       [12, 13, 14, 15, 16, 17],
       [18, 19, 20,  0, 22, 23],
       [24, 25, 26, 27, 28, 29],
       [30, 31, 32, 33, 34, 35]])
>>> ndimage.grey_closing(a, size=(3,3))
array([[ 7,  7,  8,  9, 10, 11],
       [ 7,  7,  8,  9, 10, 11],
       [13, 13, 14, 15, 16, 17],
       [19, 19, 20, 20, 22, 23],
       [25, 25, 26, 27, 28, 29],
       [31, 31, 32, 33, 34, 35]])
>>> # Note that the local minimum a[3,3] has disappeared