Standard array subclasses¶
The ndarray
in NumPy is a “newstyle” Python
builtintype. Therefore, it can be inherited from (in Python or in C)
if desired. Therefore, it can form a foundation for many useful
classes. Often whether to subclass the array object or to simply use
the core array component as an internal part of a new class is a
difficult decision, and can be simply a matter of choice. NumPy has
several tools for simplifying how your new object interacts with other
array objects, and so the choice may not be significant in the
end. One way to simplify the question is by asking yourself if the
object you are interested in can be replaced as a single array or does
it really require two or more arrays at its core.
Note that asarray
always returns the baseclass ndarray. If
you are confident that your use of the array object can handle any
subclass of an ndarray, then asanyarray
can be used to allow
subclasses to propagate more cleanly through your subroutine. In
principal a subclass could redefine any aspect of the array and
therefore, under strict guidelines, asanyarray
would rarely be
useful. However, most subclasses of the array object will not
redefine certain aspects of the array object such as the buffer
interface, or the attributes of the array. One important example,
however, of why your subroutine may not be able to handle an arbitrary
subclass of an array is that matrices redefine the “*” operator to be
matrixmultiplication, rather than elementbyelement multiplication.
Special attributes and methods¶
See also
NumPy provides several hooks that classes can customize:

class.
__array_ufunc__
(ufunc, method, *inputs, **kwargs)¶ New in version 1.13.
Note
The API is provisional, i.e., we do not yet guarantee backward compatibility.
Any class, ndarray subclass or not, can define this method or set it to
None
in order to override the behavior of NumPy’s ufuncs. This works quite similarly to Python’s__mul__
and other binary operation routines. ufunc is the ufunc object that was called.
 method is a string indicating which Ufunc method was called
(one of
"__call__"
,"reduce"
,"reduceat"
,"accumulate"
,"outer"
,"inner"
).  inputs is a tuple of the input arguments to the
ufunc
.  kwargs is a dictionary containing the optional input arguments
of the ufunc. If given, any
out
arguments, both positional and keyword, are passed as atuple
in kwargs. See the discussion in Universal functions (ufunc) for details.
The method should return either the result of the operation, or
NotImplemented
if the operation requested is not implemented.If one of the input or output arguments has a
__array_ufunc__
method, it is executed instead of the ufunc. If more than one of the arguments implements__array_ufunc__
, they are tried in the order: subclasses before superclasses, inputs before outputs, otherwise left to right. The first routine returning something other thanNotImplemented
determines the result. If all of the__array_ufunc__
operations returnNotImplemented
, aTypeError
is raised.Note
We intend to reimplement numpy functions as (generalized) Ufunc, in which case it will become possible for them to be overridden by the
__array_ufunc__
method. A prime candidate ismatmul
, which currently is not a Ufunc, but could be relatively easily be rewritten as a (set of) generalized Ufuncs. The same may happen with functions such asmedian
,min
, andargsort
.Like with some other special methods in python, such as
__hash__
and__iter__
, it is possible to indicate that your class does not support ufuncs by setting__array_ufunc__ = None
. Ufuncs always raiseTypeError
when called on an object that sets__array_ufunc__ = None
.The presence of
__array_ufunc__
also influences howndarray
handles binary operations likearr + obj
andarr < obj
whenarr
is anndarray
andobj
is an instance of a custom class. There are two possibilities. Ifobj.__array_ufunc__
is present and notNone
, thenndarray.__add__
and friends will delegate to the ufunc machinery, meaning thatarr + obj
becomesnp.add(arr, obj)
, and thenadd
invokesobj.__array_ufunc__
. This is useful if you want to define an object that acts like an array.Alternatively, if
obj.__array_ufunc__
is set toNone
, then as a special case, special methods likendarray.__add__
will notice this and unconditionally raiseTypeError
. This is useful if you want to create objects that interact with arrays via binary operations, but are not themselves arrays. For example, a units handling system might have an objectm
representing the “meters” unit, and want to support the syntaxarr * m
to represent that the array has units of “meters”, but not want to otherwise interact with arrays via ufuncs or otherwise. This can be done by setting__array_ufunc__ = None
and defining__mul__
and__rmul__
methods. (Note that this means that writing an__array_ufunc__
that always returnsNotImplemented
is not quite the same as setting__array_ufunc__ = None
: in the former case,arr + obj
will raiseTypeError
, while in the latter case it is possible to define a__radd__
method to prevent this.)The above does not hold for inplace operators, for which
ndarray
never returnsNotImplemented
. Hence,arr += obj
would always lead to aTypeError
. This is because for arrays inplace operations cannot generically be replaced by a simple reverse operation. (For instance, by default,arr += obj
would be translated toarr = arr + obj
, i.e.,arr
would be replaced, contrary to what is expected for inplace array operations.)Note
If you define
__array_ufunc__
: If you are not a subclass of
ndarray
, we recommend your class define special methods like__add__
and__lt__
that delegate to ufuncs just like ndarray does. An easy way to do this is to subclass fromNDArrayOperatorsMixin
.  If you subclass
ndarray
, we recommend that you put all your override logic in__array_ufunc__
and not also override special methods. This ensures the class hierarchy is determined in only one place rather than separately by the ufunc machinery and by the binary operation rules (which gives preference to special methods of subclasses; the alternative way to enforce a oneplace only hierarchy, of setting__array_ufunc__
toNone
, would seem very unexpected and thus confusing, as then the subclass would not work at all with ufuncs). ndarray
defines its own__array_ufunc__
, which, evaluates the ufunc if no arguments have overrides, and returnsNotImplemented
otherwise. This may be useful for subclasses for which__array_ufunc__
converts any instances of its own class tondarray
: it can then pass these on to its superclass usingsuper().__array_ufunc__(*inputs, **kwargs)
, and finally return the results after possible backconversion. The advantage of this practice is that it ensures that it is possible to have a hierarchy of subclasses that extend the behaviour. See Subclassing ndarray for details.
Note
If a class defines the
__array_ufunc__
method, this disables the__array_wrap__
,__array_prepare__
,__array_priority__
mechanism described below for ufuncs (which may eventually be deprecated).

class.
__array_finalize__
(obj)¶ This method is called whenever the system internally allocates a new array from obj, where obj is a subclass (subtype) of the
ndarray
. It can be used to change attributes of self after construction (so as to ensure a 2d matrix for example), or to update metainformation from the “parent.” Subclasses inherit a default implementation of this method that does nothing.

class.
__array_prepare__
(array, context=None)¶ At the beginning of every ufunc, this method is called on the input object with the highest array priority, or the output object if one was specified. The output array is passed in and whatever is returned is passed to the ufunc. Subclasses inherit a default implementation of this method which simply returns the output array unmodified. Subclasses may opt to use this method to transform the output array into an instance of the subclass and update metadata before returning the array to the ufunc for computation.
Note
For ufuncs, it is hoped to eventually deprecate this method in favour of
__array_ufunc__
.

class.
__array_wrap__
(array, context=None)¶ At the end of every ufunc, this method is called on the input object with the highest array priority, or the output object if one was specified. The ufunccomputed array is passed in and whatever is returned is passed to the user. Subclasses inherit a default implementation of this method, which transforms the array into a new instance of the object’s class. Subclasses may opt to use this method to transform the output array into an instance of the subclass and update metadata before returning the array to the user.
Note
For ufuncs, it is hoped to eventually deprecate this method in favour of
__array_ufunc__
.

class.
__array_priority__
¶ The value of this attribute is used to determine what type of object to return in situations where there is more than one possibility for the Python type of the returned object. Subclasses inherit a default value of 0.0 for this attribute.
Note
For ufuncs, it is hoped to eventually deprecate this method in favour of
__array_ufunc__
.
Matrix objects¶
matrix
objects inherit from the ndarray and therefore, they
have the same attributes and methods of ndarrays. There are six
important differences of matrix objects, however, that may lead to
unexpected results when you use matrices but expect them to act like
arrays:
Matrix objects can be created using a string notation to allow Matlabstyle syntax where spaces separate columns and semicolons (‘;’) separate rows.
Matrix objects are always twodimensional. This has farreaching implications, in that m.ravel() is still twodimensional (with a 1 in the first dimension) and item selection returns twodimensional objects so that sequence behavior is fundamentally different than arrays.
Matrix objects override multiplication to be matrixmultiplication. Make sure you understand this for functions that you may want to receive matrices. Especially in light of the fact that asanyarray(m) returns a matrix when m is a matrix.
Matrix objects override power to be matrix raised to a power. The same warning about using power inside a function that uses asanyarray(...) to get an array object holds for this fact.
The default __array_priority__ of matrix objects is 10.0, and therefore mixed operations with ndarrays always produce matrices.
Matrices have special attributes which make calculations easier. These are
matrix.T
Returns the transpose of the matrix. matrix.H
Returns the (complex) conjugate transpose of self. matrix.I
Returns the (multiplicative) inverse of invertible self. matrix.A
Return self as an ndarray
object.
Warning
Matrix objects override multiplication, ‘*’, and power, ‘**’, to be matrixmultiplication and matrix power, respectively. If your subroutine can accept subclasses and you do not convert to base class arrays, then you must use the ufuncs multiply and power to be sure that you are performing the correct operation for all inputs.
The matrix class is a Python subclass of the ndarray and can be used
as a reference for how to construct your own subclass of the ndarray.
Matrices can be created from other matrices, strings, and anything
else that can be converted to an ndarray
. The name “mat “is an
alias for “matrix “in NumPy.
matrix 
Returns a matrix from an arraylike object, or from a string of data. 
asmatrix (data[, dtype]) 
Interpret the input as a matrix. 
bmat (obj[, ldict, gdict]) 
Build a matrix object from a string, nested sequence, or array. 
Example 1: Matrix creation from a string
>>> a=mat('1 2 3; 4 5 3')
>>> print (a*a.T).I
[[ 0.2924 0.1345]
[0.1345 0.0819]]
Example 2: Matrix creation from nested sequence
>>> mat([[1,5,10],[1.0,3,4j]])
matrix([[ 1.+0.j, 5.+0.j, 10.+0.j],
[ 1.+0.j, 3.+0.j, 0.+4.j]])
Example 3: Matrix creation from an array
>>> mat(random.rand(3,3)).T
matrix([[ 0.7699, 0.7922, 0.3294],
[ 0.2792, 0.0101, 0.9219],
[ 0.3398, 0.7571, 0.8197]])
Memorymapped file arrays¶
Memorymapped files are useful for reading and/or modifying small segments of a large file with regular layout, without reading the entire file into memory. A simple subclass of the ndarray uses a memorymapped file for the data buffer of the array. For small files, the overhead of reading the entire file into memory is typically not significant, however for large files using memory mapping can save considerable resources.
Memorymappedfile arrays have one additional method (besides those
they inherit from the ndarray): .flush()
which
must be called manually by the user to ensure that any changes to the
array actually get written to disk.
memmap 
Create a memorymap to an array stored in a binary file on disk. 
memmap.flush () 
Write any changes in the array to the file on disk. 
Example:
>>> a = memmap('newfile.dat', dtype=float, mode='w+', shape=1000)
>>> a[10] = 10.0
>>> a[30] = 30.0
>>> del a
>>> b = fromfile('newfile.dat', dtype=float)
>>> print b[10], b[30]
10.0 30.0
>>> a = memmap('newfile.dat', dtype=float)
>>> print a[10], a[30]
10.0 30.0
Character arrays (numpy.char
)¶
Note
The chararray
class exists for backwards compatibility with
Numarray, it is not recommended for new development. Starting from numpy
1.4, if one needs arrays of strings, it is recommended to use arrays of
dtype
object_
, string_
or unicode_
, and use the free functions
in the numpy.char
module for fast vectorized string operations.
These are enhanced arrays of either string_
type or
unicode_
type. These arrays inherit from the
ndarray
, but speciallydefine the operations +
, *
,
and %
on a (broadcasting) elementbyelement basis. These
operations are not available on the standard ndarray
of
character type. In addition, the chararray
has all of the
standard string
(and unicode
) methods,
executing them on an elementbyelement basis. Perhaps the easiest
way to create a chararray is to use self.view(chararray)
where self is an ndarray of str or unicode
datatype. However, a chararray can also be created using the
numpy.chararray
constructor, or via the
numpy.char.array
function:
chararray 
Provides a convenient view on arrays of string and unicode values. 
core.defchararray.array (obj[, itemsize, ...]) 
Create a chararray . 
Another difference with the standard ndarray of str datatype is that the chararray inherits the feature introduced by Numarray that whitespace at the end of any element in the array will be ignored on item retrieval and comparison operations.
Record arrays (numpy.rec
)¶
NumPy provides the recarray
class which allows accessing the
fields of a structured array as attributes, and a corresponding
scalar data type object record
.
recarray 
Construct an ndarray that allows field access using attributes. 
record 
A datatype scalar that allows field access as attribute lookup. 
Masked arrays (numpy.ma
)¶
See also
Standard container class¶
For backward compatibility and as a standard “container “class, the
UserArray from Numeric has been brought over to NumPy and named
numpy.lib.user_array.container
The container class is a
Python class whose self.array attribute is an ndarray. Multiple
inheritance is probably easier with numpy.lib.user_array.container
than with the ndarray itself and so it is included by default. It is
not documented here beyond mentioning its existence because you are
encouraged to use the ndarray class directly if you can.
numpy.lib.user_array.container (data[, ...]) 
Standard containerclass for easy multipleinheritance. 
Array Iterators¶
Iterators are a powerful concept for array processing. Essentially, iterators implement a generalized forloop. If myiter is an iterator object, then the Python code:
for val in myiter:
...
some code involving val
...
calls val = myiter.next()
repeatedly until StopIteration
is
raised by the iterator. There are several ways to iterate over an
array that may be useful: default iteration, flat iteration, and
dimensional enumeration.
Default iteration¶
The default iterator of an ndarray object is the default Python iterator of a sequence type. Thus, when the array object itself is used as an iterator. The default behavior is equivalent to:
for i in range(arr.shape[0]):
val = arr[i]
This default iterator selects a subarray of dimension from the array. This can be a useful construct for defining recursive algorithms. To loop over the entire array requires forloops.
>>> a = arange(24).reshape(3,2,4)+10
>>> for val in a:
... print 'item:', val
item: [[10 11 12 13]
[14 15 16 17]]
item: [[18 19 20 21]
[22 23 24 25]]
item: [[26 27 28 29]
[30 31 32 33]]
Flat iteration¶
ndarray.flat 
A 1D iterator over the array. 
As mentioned previously, the flat attribute of ndarray objects returns an iterator that will cycle over the entire array in Cstyle contiguous order.
>>> for i, val in enumerate(a.flat):
... if i%5 == 0: print i, val
0 10
5 15
10 20
15 25
20 30
Here, I’ve used the builtin enumerate iterator to return the iterator index as well as the value.
Ndimensional enumeration¶
ndenumerate (arr) 
Multidimensional index iterator. 
Sometimes it may be useful to get the Ndimensional index while iterating. The ndenumerate iterator can achieve this.
>>> for i, val in ndenumerate(a):
... if sum(i)%5 == 0: print i, val
(0, 0, 0) 10
(1, 1, 3) 25
(2, 0, 3) 29
(2, 1, 2) 32
Iterator for broadcasting¶
broadcast 
Produce an object that mimics broadcasting. 
The general concept of broadcasting is also available from Python
using the broadcast
iterator. This object takes
objects as inputs and returns an iterator that returns tuples
providing each of the input sequence elements in the broadcasted
result.
>>> for val in broadcast([[1,0],[2,3]],[0,1]):
... print val
(1, 0)
(0, 1)
(2, 0)
(3, 1)