SciPy

scipy.stats.ncf

scipy.stats.ncf = <scipy.stats._continuous_distns.ncf_gen object at 0x4e05f90>[source]

A non-central F distribution continuous random variable.

Continuous random variables are defined from a standard form and may require some shape parameters to complete its specification. Any optional keyword parameters can be passed to the methods of the RV object as given below:

Parameters :

x : array_like

quantiles

q : array_like

lower or upper tail probability

dfn, dfd, nc : array_like

shape parameters

loc : array_like, optional

location parameter (default=0)

scale : array_like, optional

scale parameter (default=1)

size : int or tuple of ints, optional

shape of random variates (default computed from input arguments )

moments : str, optional

composed of letters [‘mvsk’] specifying which moments to compute where ‘m’ = mean, ‘v’ = variance, ‘s’ = (Fisher’s) skew and ‘k’ = (Fisher’s) kurtosis. (default=’mv’)

Alternatively, the object may be called (as a function) to fix the shape, :

location, and scale parameters returning a “frozen” continuous RV object: :

rv = ncf(dfn, dfd, nc, loc=0, scale=1) :

  • Frozen RV object with the same methods but holding the given shape, location, and scale fixed.

Notes

The probability density function for ncf is:

ncf.pdf(x, df1, df2, nc) = exp(nc/2 + nc*df1*x/(2*(df1*x+df2)))
  • df1**(df1/2) * df2**(df2/2) * x**(df1/2-1)
  • (df2+df1*x)**(-(df1+df2)/2)
  • gamma(df1/2)*gamma(1+df2/2)
  • L^{v1/2-1}^{v2/2}(-nc*v1*x/(2*(v1*x+v2)))

/ (B(v1/2, v2/2) * gamma((v1+v2)/2))

for df1, df2, nc > 0.

Examples

>>> from scipy.stats import ncf
>>> import matplotlib.pyplot as plt
>>> fig, ax = plt.subplots(1, 1)

Calculate a few first moments:

>>> dfn, dfd, nc = 27, 27, 0.415784417992
>>> mean, var, skew, kurt = ncf.stats(dfn, dfd, nc, moments='mvsk')

Display the probability density function (pdf):

>>> x = np.linspace(ncf.ppf(0.01, dfn, dfd, nc),
...               ncf.ppf(0.99, dfn, dfd, nc), 100)
>>> ax.plot(x, ncf.pdf(x, dfn, dfd, nc),
...          'r-', lw=5, alpha=0.6, label='ncf pdf')

Alternatively, freeze the distribution and display the frozen pdf:

>>> rv = ncf(dfn, dfd, nc)
>>> ax.plot(x, rv.pdf(x), 'k-', lw=2, label='frozen pdf')

Check accuracy of cdf and ppf:

>>> vals = ncf.ppf([0.001, 0.5, 0.999], dfn, dfd, nc)
>>> np.allclose([0.001, 0.5, 0.999], ncf.cdf(vals, dfn, dfd, nc))
True

Generate random numbers:

>>> r = ncf.rvs(dfn, dfd, nc, size=1000)

And compare the histogram:

>>> ax.hist(r, normed=True, histtype='stepfilled', alpha=0.2)
>>> ax.legend(loc='best', frameon=False)
>>> plt.show()

(Source code)

../_images/scipy-stats-ncf-1.png

Methods

rvs(dfn, dfd, nc, loc=0, scale=1, size=1) Random variates.
pdf(x, dfn, dfd, nc, loc=0, scale=1) Probability density function.
logpdf(x, dfn, dfd, nc, loc=0, scale=1) Log of the probability density function.
cdf(x, dfn, dfd, nc, loc=0, scale=1) Cumulative density function.
logcdf(x, dfn, dfd, nc, loc=0, scale=1) Log of the cumulative density function.
sf(x, dfn, dfd, nc, loc=0, scale=1) Survival function (1-cdf — sometimes more accurate).
logsf(x, dfn, dfd, nc, loc=0, scale=1) Log of the survival function.
ppf(q, dfn, dfd, nc, loc=0, scale=1) Percent point function (inverse of cdf — percentiles).
isf(q, dfn, dfd, nc, loc=0, scale=1) Inverse survival function (inverse of sf).
moment(n, dfn, dfd, nc, loc=0, scale=1) Non-central moment of order n
stats(dfn, dfd, nc, loc=0, scale=1, moments=’mv’) Mean(‘m’), variance(‘v’), skew(‘s’), and/or kurtosis(‘k’).
entropy(dfn, dfd, nc, loc=0, scale=1) (Differential) entropy of the RV.
fit(data, dfn, dfd, nc, loc=0, scale=1) Parameter estimates for generic data.
expect(func, dfn, dfd, nc, loc=0, scale=1, lb=None, ub=None, conditional=False, **kwds) Expected value of a function (of one argument) with respect to the distribution.
median(dfn, dfd, nc, loc=0, scale=1) Median of the distribution.
mean(dfn, dfd, nc, loc=0, scale=1) Mean of the distribution.
var(dfn, dfd, nc, loc=0, scale=1) Variance of the distribution.
std(dfn, dfd, nc, loc=0, scale=1) Standard deviation of the distribution.
interval(alpha, dfn, dfd, nc, loc=0, scale=1) Endpoints of the range that contains alpha percent of the distribution

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